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Genome Editing in Drug Discovery. Группа авторов
Читать онлайн.Название Genome Editing in Drug Discovery
Год выпуска 0
isbn 9781119671398
Автор произведения Группа авторов
Жанр Биология
Издательство John Wiley & Sons Limited
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2 Historical Overview of Genome Editing from Bacteria to Higher Eukaryotes
Marcello Maresca
Genome Engineering, Discovery Sciences, BioPharmaceuticals R&D, AstraZeneca, Gothenburg, Sweden
2.1 Introduction
Molecular cloning methods have been instrumental for the establishment of the biotechnological industry. The ability to clone any DNA sequence of interest into a DNA vector has been a key technology advancement toward the generation of cellular and animal model of disease and the development of biopharmaceuticals. Traditional molecular cloning methods mostly rely on restriction enzymes‐mediated digestion and ligation of the digested fragments. Classical restriction enzymes recognize a relatively short DNA sequence and as a consequence, they are too unspecific to be used directly for DNA engineering applications in cellula.
Novel improvements in DNA assembly methods combined with the cost reduction and with the increase in accuracy of DNA synthesis processes have led to the possibility of assembling large DNA constructs in vitro. Synthetic genomes will have a key role in future DNA engineering platforms but they will not be discussed in this chapter and in this book, where we will focus on in cellula genome engineering approaches.
In this chapter, I will give a brief description of the advancements in the precise genome editing field starting from observations of single‐stranded oligonucleotides‐mediated repair in yeasts to Recombineering and CRISPR‐Cas9‐dependent editing. These technologies have all greatly expanded the tools and methods that are used to generate disease models and to develop assays for drug discovery (Figure 2.1).
2.2 Bacterial DNA Engineering (Recombineering)
Microbes and microbial‐derived systems have been extensively used for the development of novel DNA engineering tools and for the application of these tools to DNA cloning. Restriction enzymes, recombinase systems such as CRE/Lox, integrases such as ΦC31‐Int, and the Cas9‐CRISPR system have all microbial origin. Recombinases and integrases‐based systems have been extensively used to engineer the mammalian genomes but we will not discuss them in this book that is focusing on scarless genome engineering systems. This chapter will focus on the development of Recombineering for bacterial engineering and its use in genome engineering with particular focus on applications in drug discovery.
The inspiration for the Recombineering (recombination‐mediated